Last updated on 2025-12-08 13:48:52 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.6.14 | 26.98 | 750.45 | 777.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.6.14 | 17.49 | 469.57 | 487.06 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.6.14 | 60.00 | 281.03 | 341.03 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.6.14 | 107.00 | 286.18 | 393.18 | ERROR | |
| r-devel-windows-x86_64 | 0.6.14 | 30.00 | 627.00 | 657.00 | OK | |
| r-patched-linux-x86_64 | 0.6.14 | 31.87 | 702.19 | 734.06 | OK | |
| r-release-linux-x86_64 | 0.6.14 | 27.84 | 700.08 | 727.92 | OK | |
| r-release-macos-arm64 | 0.6.13 | 10.00 | 158.00 | 168.00 | OK | |
| r-release-macos-x86_64 | 0.6.14 | 19.00 | 669.00 | 688.00 | OK | |
| r-release-windows-x86_64 | 0.6.14 | 28.00 | 623.00 | 651.00 | OK | |
| r-oldrel-macos-arm64 | 0.6.14 | 6.00 | 162.00 | 168.00 | NOTE | |
| r-oldrel-macos-x86_64 | 0.6.14 | 42.00 | 765.00 | 807.00 | NOTE | |
| r-oldrel-windows-x86_64 | 0.6.14 | 39.00 | 875.00 | 914.00 | NOTE |
Version: 0.6.14
Check: examples
Result: ERROR
Running examples in ‘rtables-Ex.R’ failed
The error most likely occurred in:
> ### Name: add_colcounts
> ### Title: Add the column population counts to the header
> ### Aliases: add_colcounts
>
> ### ** Examples
>
> lyt <- basic_table() %>%
+ split_cols_by("ARM") %>%
+ add_colcounts() %>%
+ split_rows_by("RACE", split_fun = drop_split_levels) %>%
+ analyze("AGE", afun = function(x) list(min = min(x), max = max(x)))
> lyt
A Pre-data Table Layout
Column-Split Structure:
ARM (lvls)
Row-Split Structure:
RACE (lvls) -> AGE (** analysis **)
>
> tbl <- build_table(lyt, DM)
Error in match.arg(round_type) : 'arg' must be of length 1
Calls: build_table ... <Anonymous> -> format_rcell -> format_value -> match.arg
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.6.14
Check: tests
Result: ERROR
Running ‘testthat.R’
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> if (requireNamespace("testthat", quietly = TRUE)) {
+ library(testthat)
+ library(rtables)
+ test_check("rtables", reporter = "check")
+ }
Loading required package: formatters
Attaching package: 'formatters'
The following object is masked from 'package:base':
%||%
Loading required package: magrittr
Attaching package: 'magrittr'
The following objects are masked from 'package:testthat':
equals, is_less_than, not
Attaching package: 'rtables'
The following object is masked from 'package:utils':
str
Attaching package: 'dplyr'
The following objects are masked from 'package:stats':
filter, lag
The following objects are masked from 'package:base':
intersect, setdiff, setequal, union
Error in `source_dir()`:
! Failed to evaluate './setup-fakedata.R'.
Caused by error in `match.arg()`:
! 'arg' must be of length 1
Backtrace:
▆
1. ├─testthat::test_check("rtables", reporter = "check")
2. │ └─testthat::test_dir(...)
3. │ └─testthat:::test_files(...)
4. │ └─testthat:::test_files_serial(...)
5. │ └─testthat:::test_files_setup_state(...)
6. │ └─testthat::source_test_setup(".", env)
7. │ └─testthat::source_dir(path, "^setup.*\\.[rR]$", env = env, wrap = FALSE)
8. │ └─base::lapply(...)
9. │ └─testthat (local) FUN(X[[i]], ...)
10. │ └─testthat::source_file(...)
11. │ ├─base::withCallingHandlers(...)
12. │ └─base::eval(exprs, env)
13. │ └─base::eval(exprs, env)
14. │ └─rtables:::tt_to_test_wrapping() at ./setup-fakedata.R:182:1
15. │ └─... %>% build_table(trimmed_data) at ./setup-fakedata.R:169:3
16. ├─rtables::build_table(., trimmed_data)
17. │ └─rtables::update_ref_indexing(tab)
18. │ ├─formatters::make_row_df(tt)
19. │ └─rtables::make_row_df(tt)
20. │ └─rtables (local) .local(...)
21. │ ├─formatters::make_row_df(...)
22. │ └─rtables::make_row_df(...)
23. │ └─rtables (local) .local(...)
24. │ ├─formatters::make_row_df(...)
25. │ └─rtables::make_row_df(...)
26. │ └─rtables (local) .local(...)
27. │ ├─formatters::make_row_df(...)
28. │ └─rtables::make_row_df(...)
29. │ └─rtables (local) .local(...)
30. │ ├─formatters::pagdfrow(...)
31. │ │ └─base::data.frame(...)
32. │ ├─formatters::nlines(...)
33. │ └─rtables::nlines(...)
34. │ ├─base::as.vector(get_formatted_cells(x))
35. │ ├─rtables::get_formatted_cells(x)
36. │ └─rtables::get_formatted_cells(x)
37. │ ├─base::matrix(...)
38. │ ├─base::unlist(...)
39. │ └─base::Map(...)
40. │ └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
41. │ └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
42. │ └─rtables::format_rcell(...)
43. │ └─formatters::format_value(...)
44. │ └─base::match.arg(round_type)
45. │ └─base::stop(gettextf("'%s' must be of length 1", "arg"), domain = NA)
46. └─base::.handleSimpleError(...)
47. └─testthat (local) h(simpleError(msg, call))
48. └─cli::cli_abort(...)
49. └─rlang::abort(...)
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.6.14
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘advanced_usage.Rmd’ using rmarkdown
Quitting from advanced_usage.Rmd:30-38 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt1, d1)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::pagdfrow(...)
10. │ └─base::data.frame(...)
11. ├─formatters::nlines(...)
12. └─rtables::nlines(...)
13. ├─base::as.vector(get_formatted_cells(x))
14. ├─rtables::get_formatted_cells(x)
15. └─rtables::get_formatted_cells(x)
16. ├─base::matrix(...)
17. ├─base::unlist(...)
18. └─base::Map(...)
19. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
20. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
21. └─rtables::format_rcell(...)
22. └─formatters::format_value(...)
23. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'advanced_usage.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘advanced_usage.Rmd’
--- re-building ‘ard_how_to.Rmd’ using rmarkdown
Quitting from ard_how_to.Rmd:46-57 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, ADSL)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::pagdfrow(...)
13. │ └─base::data.frame(...)
14. ├─formatters::nlines(...)
15. └─rtables::nlines(...)
16. ├─base::as.vector(get_formatted_cells(x))
17. ├─rtables::get_formatted_cells(x)
18. └─rtables::get_formatted_cells(x)
19. ├─base::matrix(...)
20. ├─base::unlist(...)
21. └─base::Map(...)
22. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
23. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
24. └─rtables::format_rcell(...)
25. └─formatters::format_value(...)
26. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'ard_how_to.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘ard_how_to.Rmd’
--- re-building ‘baseline.Rmd’ using rmarkdown
Quitting from baseline.Rmd:41-50 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, DM)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::pagdfrow(...)
10. │ └─base::data.frame(...)
11. ├─formatters::nlines(...)
12. └─rtables::nlines(...)
13. ├─base::as.vector(get_formatted_cells(x))
14. ├─rtables::get_formatted_cells(x)
15. └─rtables::get_formatted_cells(x)
16. ├─base::matrix(...)
17. ├─base::unlist(...)
18. └─base::Map(...)
19. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
20. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
21. └─rtables::format_rcell(...)
22. └─formatters::format_value(...)
23. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'baseline.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘baseline.Rmd’
--- re-building ‘clinical_trials.Rmd’ using rmarkdown
Quitting from clinical_trials.Rmd:78-92 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, ADSL)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::pagdfrow(...)
10. │ └─base::data.frame(...)
11. ├─formatters::nlines(...)
12. └─rtables::nlines(...)
13. ├─base::as.vector(get_formatted_cells(x))
14. ├─rtables::get_formatted_cells(x)
15. └─rtables::get_formatted_cells(x)
16. ├─base::matrix(...)
17. ├─base::unlist(...)
18. └─base::Map(...)
19. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
20. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
21. └─rtables::format_rcell(...)
22. └─formatters::format_value(...)
23. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'clinical_trials.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘clinical_trials.Rmd’
--- re-building ‘col_counts.Rmd’ using rmarkdown
Quitting from col_counts.Rmd:45-55 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, ex_adsl)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::pagdfrow(...)
10. │ └─base::data.frame(...)
11. ├─formatters::nlines(...)
12. └─rtables::nlines(...)
13. ├─base::as.vector(get_formatted_cells(x))
14. ├─rtables::get_formatted_cells(x)
15. └─rtables::get_formatted_cells(x)
16. ├─base::matrix(...)
17. ├─base::unlist(...)
18. └─base::Map(...)
19. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
20. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
21. └─rtables::format_rcell(...)
22. └─formatters::format_value(...)
23. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'col_counts.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘col_counts.Rmd’
--- re-building ‘custom_appearance.Rmd’ using rmarkdown
Quitting from custom_appearance.Rmd:72-85 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, DM)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::pagdfrow(...)
10. │ └─base::data.frame(...)
11. ├─formatters::nlines(...)
12. └─rtables::nlines(...)
13. ├─base::as.vector(get_formatted_cells(x))
14. ├─rtables::get_formatted_cells(x)
15. └─rtables::get_formatted_cells(x)
16. ├─base::matrix(...)
17. ├─base::unlist(...)
18. └─base::Map(...)
19. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
20. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
21. └─rtables::format_rcell(...)
22. └─formatters::format_value(...)
23. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'custom_appearance.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘custom_appearance.Rmd’
--- re-building ‘example_analysis_coxreg.Rmd’ using rmarkdown
Quitting from example_analysis_coxreg.Rmd:389-392 [unnamed-chunk-11]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, anl)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::pagdfrow(...)
13. │ └─base::data.frame(...)
14. ├─formatters::nlines(...)
15. └─rtables::nlines(...)
16. ├─base::as.vector(get_formatted_cells(x))
17. ├─rtables::get_formatted_cells(x)
18. └─rtables::get_formatted_cells(x)
19. ├─base::matrix(...)
20. ├─base::unlist(...)
21. └─base::Map(...)
22. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
23. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
24. └─rtables::format_rcell(...)
25. └─formatters::format_value(...)
26. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'example_analysis_coxreg.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘example_analysis_coxreg.Rmd’
--- re-building ‘exploratory_analysis.Rmd’ using rmarkdown
Quitting from exploratory_analysis.Rmd:68-71 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::qtable(ex_adsl, col_vars = "ARM")
2. └─rtables::build_table(lyt, data)
3. └─rtables::update_ref_indexing(tab)
4. ├─formatters::make_row_df(tt)
5. └─rtables::make_row_df(tt)
6. └─rtables (local) .local(...)
7. ├─formatters::make_row_df(...)
8. └─rtables::make_row_df(...)
9. └─rtables (local) .local(...)
10. ├─formatters::pagdfrow(...)
11. │ └─base::data.frame(...)
12. ├─formatters::nlines(...)
13. └─rtables::nlines(...)
14. ├─base::as.vector(get_formatted_cells(x))
15. ├─rtables::get_formatted_cells(x)
16. └─rtables::get_formatted_cells(x)
17. ├─base::matrix(...)
18. ├─base::unlist(...)
19. └─base::Map(...)
20. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
21. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
22. └─rtables::format_rcell(...)
23. └─formatters::format_value(...)
24. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'exploratory_analysis.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘exploratory_analysis.Rmd’
--- re-building ‘format_precedence.Rmd’ using rmarkdown
Quitting from format_precedence.Rmd:72-81 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, ADSL)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::pagdfrow(...)
16. │ └─base::data.frame(...)
17. ├─formatters::nlines(...)
18. └─rtables::nlines(...)
19. ├─base::as.vector(get_formatted_cells(x))
20. ├─rtables::get_formatted_cells(x)
21. └─rtables::get_formatted_cells(x)
22. ├─base::matrix(...)
23. ├─base::unlist(...)
24. └─base::Map(...)
25. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
26. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
27. └─rtables::format_rcell(...)
28. └─formatters::format_value(...)
29. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'format_precedence.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘format_precedence.Rmd’
--- re-building ‘guided_intermediate.Rmd’ using rmarkdown
[WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
--- finished re-building ‘guided_intermediate.Rmd’
--- re-building ‘guided_intermediate_afun_reqs.Rmd’ using rmarkdown
Quitting from guided_intermediate_afun_reqs.Rmd:103-118 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt_counts, ex_adae, alt_counts_df = ex_adsl)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::make_row_df(...)
16. └─rtables::make_row_df(...)
17. └─rtables (local) .local(...)
18. ├─formatters::make_row_df(...)
19. └─rtables::make_row_df(...)
20. └─rtables (local) .local(...)
21. ├─formatters::pagdfrow(...)
22. │ └─base::data.frame(...)
23. ├─formatters::nlines(...)
24. └─rtables::nlines(...)
25. ├─base::as.vector(get_formatted_cells(x))
26. ├─rtables::get_formatted_cells(x)
27. └─rtables::get_formatted_cells(x)
28. ├─base::matrix(...)
29. ├─base::unlist(...)
30. └─base::Map(...)
31. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
32. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
33. └─rtables::format_rcell(...)
34. └─formatters::format_value(...)
35. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'guided_intermediate_afun_reqs.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘guided_intermediate_afun_reqs.Rmd’
--- re-building ‘guided_intermediate_split_reqs.Rmd’ using rmarkdown
Quitting from guided_intermediate_split_reqs.Rmd:142-148 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `h()`:
! error in evaluating the argument 'x' in selecting a method for function 'toString': 'arg' must be of length 1
---
Backtrace:
▆
1. ├─tools:::.buildOneVignette(...)
2. │ ├─base::tryCatch(...)
3. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
6. │ └─engine$weave(file, quiet = quiet, encoding = enc)
7. │ └─knitr:::vweave_rmarkdown(...)
8. │ └─rmarkdown::render(...)
9. │ └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
10. │ └─knitr:::process_file(text, output)
11. │ ├─xfun:::handle_error(...)
12. │ ├─base::withCallingHandlers(...)
13. │ └─knitr:::process_group(group)
14. │ └─knitr:::call_block(x)
15. │ └─knitr:::block_exec(params)
16. │ └─knitr:::eng_r(options)
17. │ ├─knitr:::in_input_dir(...)
18. │ │ └─knitr:::in_dir(input_dir(), expr)
19. │ └─knitr (local) evaluate(...)
20. │ └─evaluate::evaluate(...)
21. │ ├─base::withRestarts(...)
22. │ │ └─base (local) withRestartList(expr, restarts)
23. │ │ ├─base (local) withOneRestart(withRestartList(expr, restarts[-nr]), restarts[[nr]])
24. │ │ │ └─base (local) doWithOneRestart(return(expr), restart)
25. │ │ └─base (local) withRestartList(expr, restarts[-nr])
26. │ │ └─base (local) withOneRestart(expr, restarts[[1L]])
27. │ │ └─base (local) doWithOneRestart(return(expr), restart)
28. │ ├─evaluate:::with_handlers(...)
29. │ │ ├─base::eval(call)
30. │ │ │ └─base::eval(call)
31. │ │ └─base::withCallingHandlers(...)
32. │ └─watcher$print_value(ev$value, ev$visible, envir)
33. │ ├─base::withVisible(handle_value(handler, value, visible, envir))
34. │ └─evaluate:::handle_value(handler, value, visible, envir)
35. │ └─handler$value(value, visible)
36. │ └─knitr (local) fun(x, options = options)
37. │ ├─base::withVisible(knit_print(x, ...))
38. │ ├─knitr::knit_print(x, ...)
39. │ └─knitr:::knit_print.default(x, ...)
40. │ └─knitr::normal_print(x)
41. │ ├─methods::show(x)
42. │ └─methods::show(x)
43. │ ├─base::cat(toString(object))
44. │ ├─base::toString(object)
45. │ └─rtables::toString(object)
46. │ └─rtables (local) .local(x, ...)
47. │ ├─base::toString(...)
48. │ ├─formatters::matrix_form(...)
49. │ └─rtables::matrix_form(...)
50. │ └─rtables:::.tbl_header_mat(obj)
51. │ ├─base::matrix(...)
52. │ └─base::rapply(...)
53. │ └─rtables (local) `<fn>`(X, ...)
54. │ ├─rtables::get_formatted_cells(x)
55. │ └─rtables::get_formatted_cells(x)
56. │ ├─base::matrix(...)
57. │ ├─base::unlist(...)
58. │ └─base::Map(...)
59. │ └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
60. │ └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
61. │ └─rtables::format_rcell(...)
62. │ └─formatters::format_value(...)
63. │ └─base::match.arg(round_type)
64. │ └─base::stop(gettextf("'%s' must be of length 1", "arg"), domain = NA)
65. └─base::.handleSimpleError(...)
66. └─base (local) h(simpleError(msg, call))
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'guided_intermediate_split_reqs.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'toString': 'arg' must be of length 1
--- failed re-building ‘guided_intermediate_split_reqs.Rmd’
--- re-building ‘guided_intermediate_translating_shells.Rmd’ using rmarkdown
Quitting from guided_intermediate_translating_shells.Rmd:78-125 [unnamed-chunk-3]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, adsl)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::pagdfrow(...)
13. │ └─base::data.frame(...)
14. ├─formatters::nlines(...)
15. └─rtables::nlines(...)
16. ├─base::as.vector(get_formatted_cells(x))
17. ├─rtables::get_formatted_cells(x)
18. └─rtables::get_formatted_cells(x)
19. ├─base::matrix(...)
20. ├─base::unlist(...)
21. └─base::Map(...)
22. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
23. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
24. └─rtables::format_rcell(...)
25. └─formatters::format_value(...)
26. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'guided_intermediate_translating_shells.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘guided_intermediate_translating_shells.Rmd’
--- re-building ‘introspecting_tables.Rmd’ using rmarkdown
Quitting from introspecting_tables.Rmd:43-54 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, ex_adsl)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::pagdfrow(...)
16. │ └─base::data.frame(...)
17. ├─formatters::nlines(...)
18. └─rtables::nlines(...)
19. ├─base::as.vector(get_formatted_cells(x))
20. ├─rtables::get_formatted_cells(x)
21. └─rtables::get_formatted_cells(x)
22. ├─base::matrix(...)
23. ├─base::unlist(...)
24. └─base::Map(...)
25. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
26. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
27. └─rtables::format_rcell(...)
28. └─formatters::format_value(...)
29. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'introspecting_tables.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘introspecting_tables.Rmd’
--- re-building ‘manual_table_construction.Rmd’ using rmarkdown
Quitting from manual_table_construction.Rmd:64-66 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::as_html(tbl, width = "80%")
2. ├─formatters::matrix_form(x, indent_rownames = TRUE, expand_newlines = expand_newlines)
3. └─rtables::matrix_form(x, indent_rownames = TRUE, expand_newlines = expand_newlines)
4. └─rtables:::.tbl_header_mat(obj)
5. ├─base::matrix(...)
6. └─base::rapply(...)
7. └─rtables (local) `<fn>`(X, ...)
8. ├─rtables::get_formatted_cells(x)
9. └─rtables::get_formatted_cells(x)
10. ├─base::matrix(...)
11. ├─base::unlist(...)
12. └─base::Map(...)
13. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
14. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
15. └─rtables::format_rcell(...)
16. └─formatters::format_value(...)
17. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'manual_table_construction.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘manual_table_construction.Rmd’
--- re-building ‘pathing.Rmd’ using rmarkdown
Quitting from pathing.Rmd:25-50 [unnamed-chunk-1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, DM)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::make_row_df(...)
16. └─rtables::make_row_df(...)
17. └─rtables (local) .local(...)
18. ├─formatters::pagdfrow(...)
19. │ └─base::data.frame(...)
20. ├─formatters::nlines(...)
21. └─rtables::nlines(...)
22. ├─base::as.vector(get_formatted_cells(x))
23. ├─rtables::get_formatted_cells(x)
24. └─rtables::get_formatted_cells(x)
25. ├─base::matrix(...)
26. ├─base::unlist(...)
27. └─base::Map(...)
28. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
29. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
30. └─rtables::format_rcell(...)
31. └─formatters::format_value(...)
32. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'pathing.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘pathing.Rmd’
--- re-building ‘rtables.Rmd’ using rmarkdown
Quitting from rtables.Rmd:104-116 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, df)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::pagdfrow(...)
16. │ └─base::data.frame(...)
17. ├─formatters::nlines(...)
18. └─rtables::nlines(...)
19. ├─base::as.vector(get_formatted_cells(x))
20. ├─rtables::get_formatted_cells(x)
21. └─rtables::get_formatted_cells(x)
22. ├─base::matrix(...)
23. ├─base::unlist(...)
24. └─base::Map(...)
25. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
26. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
27. └─rtables::format_rcell(...)
28. └─formatters::format_value(...)
29. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'rtables.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘rtables.Rmd’
--- re-building ‘sorting_pruning.Rmd’ using rmarkdown
Quitting from sorting_pruning.Rmd:50-65 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(raw_lyt, DM)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::pagdfrow(...)
16. │ └─base::data.frame(...)
17. ├─formatters::nlines(...)
18. └─rtables::nlines(...)
19. ├─base::as.vector(get_formatted_cells(x))
20. ├─rtables::get_formatted_cells(x)
21. └─rtables::get_formatted_cells(x)
22. ├─base::matrix(...)
23. ├─base::unlist(...)
24. └─base::Map(...)
25. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
26. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
27. └─rtables::format_rcell(...)
28. └─formatters::format_value(...)
29. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'sorting_pruning.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘sorting_pruning.Rmd’
--- re-building ‘split_functions.Rmd’ using rmarkdown
Quitting from split_functions.Rmd:130-140 [examples]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, vehic_data)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::make_row_df(...)
16. └─rtables::make_row_df(...)
17. └─rtables (local) .local(...)
18. ├─formatters::make_row_df(...)
19. └─rtables::make_row_df(...)
20. └─rtables (local) .local(...)
21. ├─formatters::pagdfrow(...)
22. │ └─base::data.frame(...)
23. ├─formatters::nlines(...)
24. └─rtables::nlines(...)
25. ├─base::as.vector(get_formatted_cells(x))
26. ├─rtables::get_formatted_cells(x)
27. └─rtables::get_formatted_cells(x)
28. ├─base::matrix(...)
29. ├─base::unlist(...)
30. └─base::Map(...)
31. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
32. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
33. └─rtables::format_rcell(...)
34. └─formatters::format_value(...)
35. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'split_functions.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘split_functions.Rmd’
--- re-building ‘subsetting_tables.Rmd’ using rmarkdown
Quitting from subsetting_tables.Rmd:51-62 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(...)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::pagdfrow(...)
16. │ └─base::data.frame(...)
17. ├─formatters::nlines(...)
18. └─rtables::nlines(...)
19. ├─base::as.vector(get_formatted_cells(x))
20. ├─rtables::get_formatted_cells(x)
21. └─rtables::get_formatted_cells(x)
22. ├─base::matrix(...)
23. ├─base::unlist(...)
24. └─base::Map(...)
25. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
26. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
27. └─rtables::format_rcell(...)
28. └─formatters::format_value(...)
29. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'subsetting_tables.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘subsetting_tables.Rmd’
--- re-building ‘tabulation_concepts.Rmd’ using rmarkdown
Quitting from tabulation_concepts.Rmd:103-116 [unnamed-chunk-7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, df)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::pagdfrow(...)
13. │ └─base::data.frame(...)
14. ├─formatters::nlines(...)
15. └─rtables::nlines(...)
16. ├─base::as.vector(get_formatted_cells(x))
17. ├─rtables::get_formatted_cells(x)
18. └─rtables::get_formatted_cells(x)
19. ├─base::matrix(...)
20. ├─base::unlist(...)
21. └─base::Map(...)
22. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
23. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
24. └─rtables::format_rcell(...)
25. └─formatters::format_value(...)
26. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tabulation_concepts.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘tabulation_concepts.Rmd’
--- re-building ‘tabulation_dplyr.Rmd’ using rmarkdown
Quitting from tabulation_dplyr.Rmd:56-82 [unnamed-chunk-5]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, df)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::pagdfrow(...)
16. │ └─base::data.frame(...)
17. ├─formatters::nlines(...)
18. └─rtables::nlines(...)
19. ├─base::as.vector(get_formatted_cells(x))
20. ├─rtables::get_formatted_cells(x)
21. └─rtables::get_formatted_cells(x)
22. ├─base::matrix(...)
23. ├─base::unlist(...)
24. └─base::Map(...)
25. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
26. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
27. └─rtables::format_rcell(...)
28. └─formatters::format_value(...)
29. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'tabulation_dplyr.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘tabulation_dplyr.Rmd’
--- re-building ‘title_footer.Rmd’ using rmarkdown
Quitting from title_footer.Rmd:59-75 [unnamed-chunk-4]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `match.arg()`:
! 'arg' must be of length 1
---
Backtrace:
▆
1. └─rtables::build_table(lyt, DM)
2. └─rtables::update_ref_indexing(tab)
3. ├─formatters::make_row_df(tt)
4. └─rtables::make_row_df(tt)
5. └─rtables (local) .local(...)
6. ├─formatters::make_row_df(...)
7. └─rtables::make_row_df(...)
8. └─rtables (local) .local(...)
9. ├─formatters::make_row_df(...)
10. └─rtables::make_row_df(...)
11. └─rtables (local) .local(...)
12. ├─formatters::make_row_df(...)
13. └─rtables::make_row_df(...)
14. └─rtables (local) .local(...)
15. ├─formatters::make_row_df(...)
16. └─rtables::make_row_df(...)
17. └─rtables (local) .local(...)
18. ├─formatters::make_row_df(...)
19. └─rtables::make_row_df(...)
20. └─rtables (local) .local(...)
21. ├─formatters::pagdfrow(...)
22. │ └─base::data.frame(...)
23. ├─formatters::nlines(...)
24. └─rtables::nlines(...)
25. ├─base::as.vector(get_formatted_cells(x))
26. ├─rtables::get_formatted_cells(x)
27. └─rtables::get_formatted_cells(x)
28. ├─base::matrix(...)
29. ├─base::unlist(...)
30. └─base::Map(...)
31. └─base::mapply(FUN = f, ..., SIMPLIFY = FALSE)
32. └─rtables (local) `<fn>`(val = dots[[1L]][[1L]], spn = dots[[2L]][[1L]], shelli = dots[[3L]][[1L]])
33. └─rtables::format_rcell(...)
34. └─formatters::format_value(...)
35. └─base::match.arg(round_type)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'title_footer.Rmd' failed with diagnostics:
'arg' must be of length 1
--- failed re-building ‘title_footer.Rmd’
SUMMARY: processing the following files failed:
‘advanced_usage.Rmd’ ‘ard_how_to.Rmd’ ‘baseline.Rmd’
‘clinical_trials.Rmd’ ‘col_counts.Rmd’ ‘custom_appearance.Rmd’
‘example_analysis_coxreg.Rmd’ ‘exploratory_analysis.Rmd’
‘format_precedence.Rmd’ ‘guided_intermediate_afun_reqs.Rmd’
‘guided_intermediate_split_reqs.Rmd’
‘guided_intermediate_translating_shells.Rmd’
‘introspecting_tables.Rmd’ ‘manual_table_construction.Rmd’
‘pathing.Rmd’ ‘rtables.Rmd’ ‘sorting_pruning.Rmd’
‘split_functions.Rmd’ ‘subsetting_tables.Rmd’
‘tabulation_concepts.Rmd’ ‘tabulation_dplyr.Rmd’ ‘title_footer.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.6.14
Check: installed package size
Result: NOTE
installed size is 9.3Mb
sub-directories of 1Mb or more:
R 2.1Mb
doc 6.3Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64