Last updated on 2025-08-10 13:48:27 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.91 | 251.72 | 264.63 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.62 | 235.04 | 245.66 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 16.22 | 267.02 | 283.24 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.81 | 263.79 | 278.60 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 159.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 160.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/113s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.039, elapsed: 1.876 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.967, system: 0.096, elapsed: 13.720 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.014, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.730, system: 0.202, elapsed: 6.470 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.004, elapsed: 0.266 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.022, system: 0.377, elapsed: 23.413 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.477, system: 0.038, elapsed: 2.489 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.947, system: 0.080, elapsed: 14.435 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.012, elapsed: 0.339 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.644, system: 0.159, elapsed: 5.827 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.222 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.957, system: 0.317, elapsed: 24.313 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.495, system: 0.030, elapsed: 1.800 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.917, system: 0.060, elapsed: 11.920 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.010, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.698, system: 0.174, elapsed: 5.531 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.198 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.091, system: 0.196, elapsed: 0.861 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.214, system: 0.497, elapsed: 21.447 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.440, system: 0.041, elapsed: 2.028 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.992, system: 0.150, elapsed: 13.566 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.687, system: 0.212, elapsed: 6.085 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.006, elapsed: 0.224 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.111, system: 0.480, elapsed: 13.770 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.214, system: 0.933, elapsed: 36.804 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/107s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.601, system: 0.049, elapsed: 2.063 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.915, system: 0.079, elapsed: 11.542 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.556, system: 0.189, elapsed: 5.257 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.220 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.962, system: 0.349, elapsed: 20.021 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.487, system: 0.029, elapsed: 2.415 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.998, system: 0.065, elapsed: 15.015 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.012, elapsed: 0.292 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.611, system: 0.162, elapsed: 5.399 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.002, elapsed: 0.226 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.979, system: 0.295, elapsed: 24.209 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.579, system: 0.040, elapsed: 2.684 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.006, system: 0.065, elapsed: 12.224 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.010, elapsed: 0.235 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.412, system: 0.148, elapsed: 4.594 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.004, elapsed: 0.271 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.090, system: 0.217, elapsed: 0.992 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.073, system: 0.520, elapsed: 21.997 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.519, system: 0.030, elapsed: 2.233 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.868, system: 0.056, elapsed: 11.578 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.320 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.524, system: 0.179, elapsed: 5.180 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.005, elapsed: 0.209 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.129, system: 0.569, elapsed: 13.757 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.023, system: 0.884, elapsed: 34.174 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64