Last updated on 2025-10-07 13:49:41 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.50 | 260.74 | 274.24 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 8.78 | 235.10 | 243.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.26 | 285.36 | 300.62 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.03 | 250.02 | 263.05 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 185.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 174.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.579, system: 0.062, elapsed: 2.416 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.978, system: 0.081, elapsed: 13.112 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.706, system: 0.185, elapsed: 6.204 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.004, elapsed: 0.283 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.155, system: 0.373, elapsed: 23.219 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.474, system: 0.033, elapsed: 2.655 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.987, system: 0.072, elapsed: 14.360 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.325 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.778, system: 0.165, elapsed: 6.425 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.280 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.122, system: 0.305, elapsed: 24.931 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.562, system: 0.029, elapsed: 2.705 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.965, system: 0.052, elapsed: 13.814 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.274 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.737, system: 0.175, elapsed: 5.812 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.002, elapsed: 0.226 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.132, system: 0.204, elapsed: 1.032 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.350, system: 0.494, elapsed: 24.814 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.537, system: 0.054, elapsed: 2.430 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.224, system: 0.243, elapsed: 14.475 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.017, elapsed: 0.341 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.001, system: 0.286, elapsed: 6.510 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.008, elapsed: 0.275 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.421, system: 0.497, elapsed: 18.366 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.220, system: 1.143, elapsed: 43.486 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/115s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.492, system: 0.043, elapsed: 1.674 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.849, system: 0.123, elapsed: 10.929 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.019, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.775, system: 0.251, elapsed: 6.248 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.006, elapsed: 0.243 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.997, system: 0.462, elapsed: 20.192 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.679, system: 0.069, elapsed: 2.352 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.163, system: 0.211, elapsed: 13.526 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.327 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.768, system: 0.221, elapsed: 5.927 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.007, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.502, system: 0.554, elapsed: 23.200 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.584, system: 0.052, elapsed: 2.418 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.124, system: 0.194, elapsed: 14.030 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.015, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.507, system: 0.163, elapsed: 5.218 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.011, elapsed: 0.269 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.045, system: 0.236, elapsed: 0.937 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.234, system: 0.705, elapsed: 24.125 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.458, system: 0.029, elapsed: 2.075 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.931, system: 0.081, elapsed: 14.467 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.011, elapsed: 0.256 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.552, system: 0.169, elapsed: 5.826 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.234 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.152, system: 0.496, elapsed: 16.960 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.089, system: 0.821, elapsed: 40.802 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64