668e0b5f74254e692b4d029cecb6e79e *DESCRIPTION
d6c45addfe5971f5701668b518434ab0 *LICENSE
9583f9d244e28ec8c4b73587b0423d30 *NAMESPACE
2762d3c586d38b588ddff3158cfcde1b *NEWS.md
72e9303313e30e19baf6dd21fda71234 *R/ATM_inference.R
8fdda6b4d41782ed4a3c65fd4fc2d848 *R/ATM_plot.R
c7f3d2f4cc4d879e8b89083c3b479ae5 *R/ATM_prediction.R
0eda3b8fa4bad65585d12ce96b8eba11 *R/ATM_simulations.R
ed5f0ceef7ad589367da2512f486d1d3 *R/AgeTopicModels-package.R
64bed7a434a453e08995474b1390c7a1 *R/LFA_inference.R
1a57fbba9d95e55443ca8c596bdde800 *R/data-doc.R
ad4cb58955b1e9656ddb0e7f1219a536 *R/globals.R
b56ff2b193ecba52f9ec7f3b10cca008 *R/utils-pipe.R
b1b98a4cc2bbdb9c0a9d99de03315a28 *R/zzz-imports.R
75983eac199510a16d1ede27b3aefc89 *README.md
76161b65639451c966be75488458b3c3 *build/partial.rdb
c64e248cfdf8aa33912f8dd45d08ef21 *data/HES_age_example.rda
feabd5d54bf5f91b10b65c44de8602f4 *data/HES_icd10_example.rda
468a33994fdab016977229d5efa15625 *data/SNOMED_ICD10CM.rda
372a780a22f356acfb1d9d2031c4773d *data/UKB_349_disease.rda
67187575af8657fcca777e3171f201b1 *data/UKB_HES_10topics.rda
295254dfdd2e12dfb28c98239d6761dc *data/disease_info_phecode_icd10.rda
4fc11b357d024f900088e73e37ca962b *data/phecode_icd10.rda
b01692b7ff250902284e9bbe7d5dc6b9 *data/phecode_icd10cm.rda
1c8a0862a242756a8d04516fbc9eccac *data/short_icd10.rda
4b33efa5e483b328381997e72969ec17 *data/short_icd10cm.rda
2c38c7f600dee423651bd0e04689793e *man/AgeTopicModels-package.Rd
ffc5f3859a7ca609b6197d24828ec43b *man/HES_age_example.Rd
93d5cdf02e3cf259ebae129a8137e665 *man/HES_icd10_example.Rd
92f9f264bb3634112de27210169c69a5 *man/SNOMED_ICD10CM.Rd
1ee88705ad1d54610defda92a4d9c952 *man/UKB_349_disease.Rd
984fed9d15714b763de2309d49555243 *man/UKB_HES_10topics.Rd
2fee3cc59aa8011eaa12113fa96dae56 *man/age_imputation.Rd
73489fbaf93a8350a7552a2d822c3a8f *man/disease_info_phecode_icd10.Rd
21c1e093f48fc59d202704ab0841a308 *man/diseasematrix2longdata.Rd
e1e37024581943c0135d937badc02017 *man/figures/ATM_LFA_comparison.png
f5afdcc1cf15b679204a2db87d272437 *man/figures/ATM_generative_process.png
1072d0a85a0a7024d0018009109ac959 *man/figures/ATM_schematic.png
dbe5f3dc342a3ada7985cd41cd62c853 *man/icd2phecode.Rd
4b2c262c4687e2e13e50f6ca72ea7a10 *man/loading2weights.Rd
43283b87307083c991448a16cc6d8508 *man/longdata2diseasematrix.Rd
02946e8bc950abf12d82043c4df2f0c0 *man/phecode_icd10.Rd
f959c919b7c4620a46fcc300ccdae595 *man/phecode_icd10cm.Rd
8f4aad003a999fae004ba9361f9a99d6 *man/pipe.Rd
9e541ccc7bb9e2e817f2e15abc63e2b1 *man/plot_age_topics.Rd
dd09a96a5573613c410b1cbda8a9924d *man/plot_lfa_topics.Rd
f1a97ad2bc1a8b37c3f6285ff7997e14 *man/prediction_OR.Rd
9a8d83b98a62f9c774ad4dc08d380a00 *man/short_icd10.Rd
e0bcda27448cad2c49434acc6c7ec330 *man/short_icd10cm.Rd
cf20910b3a2a24aac309988360a5dd0a *man/simulate_genetic_disease_from_topic.Rd
9ac4398982242b0a1188c9f9b27f1e1c *man/simulate_topics.Rd
3d1c82b90c44937bc513da25300fc372 *man/wrapper_ATM.Rd
58163d97beeec9b37087cbf321d4ddf7 *man/wrapper_LFA.Rd
6cee64534141738e5c6885a1263322e0 *tests/testthat.R
ccdf198984872c4aec8c8eb73ad99b15 *tests/testthat/test-inference.R
dca2c049600c4d20bdc6c12fb564ba56 *tests/testthat/test-lfa.R
2849a63b5eece66c921041dbb5788230 *tests/testthat/test-prediction.R
a3d80ae675b9a56ee41c64f2ae2d9266 *tests/testthat/test-simulated_data.R
