A B C D E F G I L M N P R S T W misc
| add | add a new method to the package | 
| add-method | add a new method to the package | 
| aoa | Area of Applicability | 
| aoa-method | Area of Applicability | 
| Arith-methods | Combine (merge) two sdmModels into a single object | 
| as.data.frame | Get a data.frame with record id values (rID) | 
| as.data.frame-method | Get a data.frame with record id values (rID) | 
| background | Generate background (pseudo-absence) records | 
| background-method | Generate background (pseudo-absence) records | 
| boxplot | boxplot | 
| boxplot-method | boxplot | 
| calibration | Calibration | 
| calibration-method | Calibration | 
| characterORmissing-class | sdmModels classes | 
| characterORnull-class | sdmModels classes | 
| coords | get or set spatial coordinates of species data | 
| coords-method | get or set spatial coordinates of species data | 
| coords<- | get or set spatial coordinates of species data | 
| coords<--method | get or set spatial coordinates of species data | 
| CRSorNULL-class | sdmModels classes | 
| data.frameORmatrix-class | sdmModels classes | 
| data.frameORnull-class | sdmModels classes | 
| density | density | 
| density-method | density | 
| ensemble | Ensemble Forecasting of SDMs | 
| ensemble-method | Ensemble Forecasting of SDMs | 
| environmentORnull-class | sdmModels classes | 
| evaluates | evaluate for accuracy | 
| evaluates-method | evaluate for accuracy | 
| expressionORnull-class | sdmModels classes | 
| featuresFrame-class | featureFrame class | 
| formulaORnull-class | sdmModels classes | 
| functionORcharacter-class | sdmModels classes | 
| functionORnull-class | sdmModels classes | 
| getEvaluation | evaluate for accuracy | 
| getEvaluation-method | evaluate for accuracy | 
| getmethod | add a new method to the package | 
| getmethod-method | add a new method to the package | 
| getmethodNames | add a new method to the package | 
| getmethodNames-method | add a new method to the package | 
| getModelId | Get information/modelIDs relevant to fitted models in a sdmModels object | 
| getModelId-method | Get information/modelIDs relevant to fitted models in a sdmModels object | 
| getModelInfo | Get information/modelIDs relevant to fitted models in a sdmModels object | 
| getModelInfo-method | Get information/modelIDs relevant to fitted models in a sdmModels object | 
| getModelObject | Get information/modelIDs relevant to fitted models in a sdmModels object | 
| getModelObject-method | Get information/modelIDs relevant to fitted models in a sdmModels object | 
| getReplication | evaluate for accuracy | 
| getReplication-method | evaluate for accuracy | 
| getResponseCurve | Generate and plot response curves | 
| getResponseCurve-method | Generate and plot response curves | 
| getRoc | plot ROC curves | 
| getRoc-method | plot ROC curves | 
| getThreshold | Identifying/extracting the best threshold to convert probabilities to Presence/Absences | 
| getThreshold-method | Identifying/extracting the best threshold to convert probabilities to Presence/Absences | 
| getVarImp | variable importance | 
| getVarImp-method | variable importance | 
| gui | Graphical User Interface | 
| gui-method | Graphical User Interface | 
| installAll | install all packages that may be required by the package | 
| installAll-method | install all packages that may be required by the package | 
| integerORnull-class | sdmModels classes | 
| listORcharacter-class | sdmModels classes | 
| listORnull-class | sdmModels classes | 
| matrixORnull-class | sdmModels classes | 
| names | Names of species | 
| names-method | Names of species | 
| names<- | Names of species | 
| names<--method | Names of species | 
| niche | Generate and plot Ecological Niche | 
| niche-method | Generate and plot Ecological Niche | 
| nicheSimilarity | Niche Similarity | 
| nicheSimilarity-method | Niche Similarity | 
| numericORnull-class | sdmModels classes | 
| pa | Converting probability of occurrence to Presence-absence | 
| pa-method | Converting probability of occurrence to Presence-absence | 
| pca | Principle Component Analysis | 
| pca-method | Principle Component Analysis | 
| plot-method | Generate and plot Ecological Niche | 
| plot-method | Generate and plot response curves | 
| predict | sdm model prediction | 
| predict-method | sdm model prediction | 
| princomp-class | Principle Component Analysis | 
| rcurve | Generate and plot response curves | 
| rcurve-method | Generate and plot response curves | 
| read.sdm | read/write sdm* object from/to a file | 
| read.sdm-method | read/write sdm* object from/to a file | 
| roc | plot ROC curves | 
| roc-method | plot ROC curves | 
| sdm | Fit and evaluate species distribution models | 
| sdm-method | Fit and evaluate species distribution models | 
| sdmAdapt | Adapting sdm* objects in the new version | 
| sdmAdapt-method | Adapting sdm* objects in the new version | 
| sdmCorrelativeMethod-class | sdmCorrelativeMethod class | 
| sdmData | creating sdm Data object | 
| sdmdata-class | An S4 class representing sdm dataset | 
| sdmData-method | creating sdm Data object | 
| sdmEvaluate-class | sdmModels classes | 
| sdmFormula-class | sdmModels classes | 
| sdmModels-class | sdmModels classes | 
| sdmSetting | creating sdmSetting object | 
| sdmSetting-method | creating sdmSetting object | 
| show-method | evaluate for accuracy | 
| show-method | sdmModels classes | 
| show-method | creating sdmSetting object | 
| show-method | An S4 class representing sdm dataset | 
| subset | Subset models in a sdmModels object | 
| subset-method | Subset models in a sdmModels object | 
| threshold | Identifying/extracting the best threshold to convert probabilities to Presence/Absences | 
| threshold-method | Identifying/extracting the best threshold to convert probabilities to Presence/Absences | 
| write.sdm | read/write sdm* object from/to a file | 
| write.sdm-method | read/write sdm* object from/to a file | 
| +-method | Combine (merge) two sdmModels into a single object | 
| .pcaObject-class | sdmModels classes | 
| [-method | Indexing to extract records of a sdmdata object | 
| [[-method | Subset models in a sdmModels object |