| uHMM-package | Construct an unsupervised Hidden Markov Model | 
| computeGap | Compute gap between eigenvalues of a similarity matrix | 
| cutCalculation | cutCalculation function | 
| emissionMatrix | Emission matrix estimation | 
| FastSpectralNJW | Jordan Fast Spectral Algorithm | 
| HMMparams | Hidden Markov Model parameter estimation | 
| KmeansAutoElbow | KmeansAutoElbow function | 
| KpartitionNJW | KpartitionNJW function | 
| MarelCarnot | MarelCarnot dataset | 
| selfKNN | Self KNN | 
| spectralPamClusteringNg | spectralPamClusteringNg function | 
| transitionMatrix | Transition matrix estimation | 
| uHMMinterface | Graphical Interface to Build an uHMM | 
| ZPGaussianSimilarity | Similarity matrix with local scale parameter |