Metabolomics Univariate and Multivariate Analysis

Documentation for package ‘muma’ version 1.4

muma-package	Metabolomics Univariate and Multivariate Analyses
box.plot	Generate box plots
chose.driver	List variables in the dataset
col.pvalues	Color-coding based on significance
explore.data	Preprocessing and principal component analysis of metabolomic data
MetaBc	Metabolomics data of B cells
muma	Metabolomics Univariate and Multivariate Analyses
oplsda	Orthogonal Partial Least Sqaure Discriminant Analysis
ostocsy	OSC Statistical TOtal Correlation SpectroscopY
outlier	Test for Outlier
Plot.pca	principal component analysis plotting
Plot.pca.loading	Plot PCA Loading Plot
Plot.pca.pvalues	PCA Loading plot color-coded for univariate significance
Plot.pca.score	Plot PCA Score Plot
Plot.plsda	PLS plots
plsda	Partial Least Square Discriminant Analysis
pvalues	P-values reporting
ransy	Ratio Analysis NMR SpectroscopY
shapiro	Shapiro Wilk's test
stocsy	Statistical TOtal Correlation SpectroscopY
stocsy.1d	Statistical TOtal Correlation SpectroscopY - monodimensional
univariate	Univariate statistical analysis
volcano	Volcano plots
welch	Welch's T test
wmw	Wilcoxon-Mann Whitney U test
work.dir	Create a working directory