Analyzing Archival Tagging Data

[Up] [Top]

Documentation for package ‘RchivalTag’ version 0.1.2

Help Pages

bin_TempTS bin depth-temperature time series data
classify_DayTime Classifying the time period of the day
combine_histos combine lists of TAD/TAT frequency data
dy_DepthTS plot time series data via the dygraphs interactive time series plotting interface.
dy_TS plot time series data via the dygraphs interactive time series plotting interface.
empty.plot_TS plot time series data
empty.resample_TS resample time series data at a lower resolution
get_DayTimeLimits Estimating the timing of sunrise, sunset, astronomical and nautical twilight events
get_geopos reads and plots geolocation estimates derived from archival tagging data
get_thermalstrat estimate thermal stratification indices
hist_tad Time-at-Depth histogram
hist_tat Time-at-Temperature histogram
image_TempDepthProfiles plots interpolated daily temperature at depth profiles
interpolate_PDTs interpolate daily temperature at depth profiles
interpolate_TempDepthProfiles interpolate daily temperature at depth profiles
merge_histos merge and/or rebin TAD/TAT-frequency data
plot_DepthTempTS plot Depth Temperature time series data
plot_DepthTempTS_resampled plot Depth Temperature time series data
plot_DepthTempTS_resampled_PDT plot Depth Temperature time series data
plot_DepthTS plot time series data
plot_geopos reads and plots geolocation estimates derived from archival tagging data
plot_TS plot time series data
RchivalTag RchivalTag - Analyzing Archival Tagging Data
read_histos reads a TAD/TAT-histogram file from archival tags
read_PDT read PDT data from archival one or multiple tags
read_TS reads Time Series Data from Archival Tags
rebin_histos merge and/or rebin TAD/TAT-frequency data
resample_DepthTempTS resample temperature at depth data from interpolated daily temperature at depth profiles or time series data
resample_PDT resample temperature at depth data from interpolated daily temperature at depth profiles or time series data
resample_TS resample time series data at a lower resolution
ts2histos convert depth and temperature time series data to discrete Time-at-Depth and Time-at-Temperature data (histogram data)
unmerge_histos unmerge previously grouped or merged lists of TAD/TAT frequency data