Negative Binomial Beta t-Test

---

Documentation for package ‘NBBttest’ version 1.0.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

NBBtatest-package	Negative Beta Binormail t-Test Package
annotat	Annotation of genes within which alternative splicing occurs
betaparametab	Estimation of parameters alpha (alpha) and beta (beta) of beta distribution
betaparametVP	Estimation of parameters V and P in count data of RNA reads
betaparametw	Estimation of proportion weights
betattest	Beta t-test
DDX39_100	DDX39 exon data with 100 exons
exondata	Exon data for NBBplot
gbetattest	Beta t-tests within groups
gtfa	gtf
jkttcell	Jurkat T-cell transcritomic data
mbetattest	Performance of multiple beta t-test on count data
mtpvadjust	Adjust p-values for multiple comparisons
myheatmap	Heatmap
myheatmap2	Heatmap2
NBBplot	Plot differential expression of exons within a specified gene using result outputed by NBBttest.
NBBtatest	Negative Beta Binormail t-Test Package
normalized	Normalization of data
oddratio	Calculation of zeta (zeta)
omega	Omega calcularion
pathwayHeatmap	Heatmap for pathways found by gene ontology analysis
pathwy.A.up	Pathway or function data
pratio	Calculation of psi (psi )
prime3_PRP8_50	3'UTR splicing data of 50 genes detected in the knockdowned PRP8 cell line
QC	Count data quality check
result	Jurkat T-cell transcritomic data with isoforms selected by NBBttest
sgRNA	sgRNA dataset
simSplicing	Simulated alternative splicing
simulat	Simulation
skjt	Simulated Null Transcriptomic data
smbetattest	Performance of multiple beta t-test on simulated data
subdata	Splite data into two subsets
upGAm	Count data of group A treated breast cancer in mice