| enrichment | Calculate enriched terms in a target set |
| goldi | Identify terms present in document. |
| hgt | Calculate the hypergeometric tail |
| make.lim | Construct Constraint Limits for Fuzzy Identification |
| make.syn | Construct synonym matrix for internal or external use |
| match | Match terms |
| MF_terms | Molecular Function terms A dataset of molecular function terms. |
| replaceExpressions | Internal expression replacement with grep |
| replaceExpressions.character | Internal expression replacement with grep |
| replaceExpressions.PlainTextDocument | Internal expression replacement with grep |
| TDM.go.df | Term document matrix of Gene Ontology Molecular Function terms |