Three methods to identify differentially expressed gene sets, ordinary least square test, Multivariate Analysis Of Variance test with n contrasts and Random forest.

Documentation for package ‘MAVTgsa’ version 1.3

MAVTgsa-package	OLS and Multivariate Analysis of Variance test for gene set analysis
data	Example data for MAVTn
design.matrix	Design matrix
GS	Example data for MAVTn
GSTplot	GST plot
Hott2	Hottelling's T square
ma.estimate	Estimate of the coefficients
MAVTgsa	OLS and Multivariate Analysis of Variance test for gene set analysis
MAVTn	OLS, Hottelling's T2 and MANOVA with n contrasts
MAVTp	Random Forests-based procedure
minp	P-values adjustment in permutation
Tols	Ordinary Least Square test
Wilksn	Wilk's Lambda for n-group multiple comparisons