![[R logo]](../../../doc/html/Rlogo.svg)
![[Up]](../../../doc/html/left.jpg)
![[Top]](../../../doc/html/up.jpg)
| DSviaDRM-package | Exploring disease similarity in terms of dysfunctional regulation mechanisms |
| comDCGL | Sort out common DCGs and DCLs in multi-diseases |
| comDCGLplot | Visualization of common DCGs and DCLs |
| DCEA | Identify DCGs (Differentially Co-expressed Genes) and DCLs (Differentially Co-expressed Links) based on the 'Differential Co-Expression Analysis' |
| DCpathway | Calculate differential co-expression values (dCs) for each pathways |
| DS | Identification of disease similarity |
| DSviaDRM | Exploring disease similarity in terms of dysfunctional regulation mechanisms |
| expressionBasedfilter | Filter genes according to expression level |
| exprs1 | Real dataset pulled down from GEO (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE22528) |
| exprs2 | Real dataset pulled down from GEO (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE35487) |
| exprs3 | Real dataset pulled down from GEO (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE9006) |
| pathways | The dataset of human pathways downloaded from two collections of MSigDB |
| tf2target | The dataset of human Transcription Factors regulate potential target genes |
| varianceBasedfilter | To filter genes according to expression variability |