| aa_cdr3_dist | Average frequency of nucleotide mutations resulting in amino acid substitution in CDR3 |
| aa_dist | Average frequency of nucleotide mutations resulting in amino acid substitution in FRs and CDRs |
| aa_plot | Plot of average frequency of nucleotide mutations resulting in amino acid substitution |
| gene_comb_funk | gene/gene ratios of two gene families |
| gene_comb_plot | Plot of gene/gene ratios of two gene families |
| germlineReconstr | Function to reconstruction of germline sequencies based on IMGT outputs. |
| IMGTtab1 | IMGT Table 1 |
| IMGTtab2 | IMGT Table 2 |
| IMGTtab7 | IMGT Table 7 |
| IMGTtab8 | IMGT Table 8 |
| Klassen | Klassen |
| lengthCDR3 | Frequency distribution of the CDR3 length |
| na_funktion | The function to check for reconsrtruction errors |
| nucleotide_mutation | The frequencies of nucleotide mutations and the frequencies of transition and transversion |
| targetingMatrix | Function to the calculation of the number of Nucleotids at three positions before and after a mutation |
| targeting_motiv | Function to calculate the difference at three positions before and after a mutation to identify the hotspot motifs |
| targeting_motive_plot | Polt of the difference at three positions before and after a mutation to identify the hotspot motifs. |