Statistical Tests for Genetic Association Studies

Documentation for package ‘AssotesteR’ version 0.1-10

ASCORE	ASCORE: Adaptive Score Test
ASCORE.Ord	ASCORE: Adaptive Score Test
AssotesteR	Statistical Tests for Genetic Association Studies
ASSU	ASSU: Adaptive Sum of Squared Score U Statistic
ASSU.Ord	ASSU: Adaptive Sum of Squared Score U Statistic
ASSUW	ASSUW: Adaptive Sum of Squared Score U Statistic
ASSUW.Ord	ASSUW: Adaptive Sum of Squared Score U Statistic
ASUM	ASUM: Adaptive Sum Statistic
ASUM.Ord	ASUM: Adaptive Sum Statistic
BST	BST: Bayesian Score Test
CALPHA	CALPHA: C-alpha Score Test
CARV	CARV: Comprehrensive Approach to Analyzing Rare Variants
CAST	CAST: Cohort Allelic Sums Test
CMAT	CMAT: Cumulative Minor Allele Test
CMC	CMC: Combined Multivariate and Collapsing Method
GDBR	GDBR: Genomic Distance-Based Regression
genodata	genodata
MULTI	MULTI: Multiple Tests
ORWSS	ORWSS: Odds Ratio Weighted Sum Statistic
RARECOVER	RARECOVER Algorithm
RBT	RBT: Replication Based Test
RVT1	RVT1: Rare Variant Test 1 for dichotomous traits
RVT2	RVT2: Rare Variant Test 2 for dichotomous traits
RWAS	RWAS: Rare-Variant Weighted Aggregate Statistic
SCORE	SCORE: Score Test (from Logistic Regression)
SEQSUM	SEQSUM: Sequential Sum Score Test
SKAT	SKAT: Sequence Kernel Association Test
SSU	SSU: Sum of Squared Score U Statistic
SSUW	SSUW: Weighted Sum of Squared Score U Statistic
SUM	SUM: Sum Test
TTEST	TTEST: Hotelling T2 Test
UMINP	UMINP: Univariate minP (minimum p-value)
VT	VT: Variable Threshold
WSS	WSS: Weighted Sum Statistic
WST	WST: Weighted Score Test