Real-Time Disease Surveillance

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Documentation for package ‘rts2’ version 0.7.7

• DESCRIPTION file.

Help Pages

rts2-package	Real-Time Disease Surveillance
birmingham_crime	Birmingham crime data
boundary	Boundary polygon for Birmingham, UK
coef.rtsFit	Extracts fixed effect coefficients from a rtsFit object
confint.rtsFit	Fixed effect confidence intervals for a 'rtsFit' object
covariance.parameters	Extracts the estimates of the covariance parameters
create_points	Create sf object from point location data
example_points	Simulated point data for running single-period examples
family.grid	Extracts the family from a 'grid' object.
family.rtsFit	Extracts the family from a 'rtsFit' object.
fitted.rtsFit	Fitted values from a 'rtsFit' object
fixed.effects	Extracts the fixed effect estimates
formula.grid	Extracts the formula from a 'grid' object.
formula.rtsFit	Extracts the formula from a 'rtsFit' object.
grid	An rts grid object
logLik.rtsFit	Extracts the log-likelihood from an rtsFit object
predict.grid	Extract predictions from a 'grid' object
predict.rtsFit	Predict from a 'rtsFit' object
print.rtsFit	Prints an rtsFit fit output
print.rtsFitSummary	Prints an rtsFitSummary fit output
progress_bar	Generates a progress bar
random.effects	Extracts the random effect estimates
residuals.grid	Residuals method for a 'grid' object
residuals.rtsFit	Residuals method for a 'rtsFit' object
rts2	Real-Time Disease Surveillance
summary.grid	Summarizes a 'grid' object
summary.rtsFit	Summary method for class "rtsFit"
vcov.grid	Calculate Variance-Covariance matrix for a maximum likelihood object stored in 'grid'
vcov.rtsFit	Extract the Variance-Covariance matrix for a 'rtsFit' object