Statistical Procedures for Agricultural Research

Documentation for package ‘agricolae’ version 1.3-7

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A B C D F G H I J K L M N O P R S T V W Y Z

Statistical Procedures for Agricultural Research

-- A --

agricolae	Statistical Procedures for Agricultural Research
AMMI	AMMI Analysis
AMMI.contour	AMMI contour
audpc	Calculating the absolute or relative value of the AUDPC
audps	The Area Under the Disease Progress Stairs

-- B --

bar.err	Plotting the standard error or standard deviance of a multiple comparison of means
bar.group	Plotting the multiple comparison of means
BIB.test	Finding the Variance Analysis of the Balanced Incomplete Block Design

-- C --

carolina	North Carolina Designs I, II and III
Chz2006	Data amendment Carhuaz 2006
CIC	Data for late blight of potatoes
clay	Data of Ralstonia population in clay soil
ComasOxapampa	Data AUDPC Comas - Oxapampa
consensus	consensus of clusters
corn	Data of corn
correl	Correlation Coefficient
correlation	Correlation analysis. Methods of Pearson, Spearman, Kendall and Lin
cotton	Data of cotton
cv.model	Coefficient of the experiment variation
cv.similarity	Coefficient of the similarity matrix variation

-- D --

DAU.test	Finding the Variance Analysis of the Augmented block Design
DC	Data for the analysis of carolina genetic design
delete.na	Omitting the rows or columns with missing observations of a matrix (NA)
design.ab	Design of experiments for a factorial
design.alpha	Alpha design type (0,1)
design.bib	Randomized Balanced Incomplete Block Designs. BIB
design.crd	Completely Randomized Design
design.cyclic	Cyclic designs
design.dau	Augmented block design
design.graeco	Graeco - latin square design
design.lattice	Lattice designs
design.lsd	Latin Square Design
design.mat	Experimental design matrix
design.rcbd	Randomized Complete Block Design
design.split	Split Plot Design
design.strip	Strip Plot Design
design.youden	Incomplete Latin Square Design
diffograph	Plotting the multiple comparison of means
disease	Data evaluation of the disease overtime
duncan.test	Duncan's new multiple range test
durbin.test	Durbin test and multiple comparison of treatments

-- F --

friedman	Friedman test and multiple comparison of treatments
frijol	Data of frijol

-- G --

genxenv	Data of potato yield in a different environment
Glycoalkaloids	Data Glycoalkaloids
graph.freq	Histogram
grass	Data for Friedman test
greenhouse	Data in greenhouse
growth	Data growth of trees

-- H --

haynes	Data of AUDPC for nonparametrical stability analysis
Hco2006	Data amendment Huanuco 2006
hcut	Cut tree of consensus
heterosis	Data of potato, Heterosis
hgroups	groups of hclust
HSD.test	Multiple comparisons: Tukey
huasahuasi	Data: Rainfall thresholds as support for timing fungicide applications in the control of potato late blight in Peru

-- I --

index.AMMI	AMMI index and yield stability
index.bio	Biodiversity Index
index.smith	Uniformity soil. Smith's Index of Soil Heterogeneity
inter.freq	Class intervals

-- J --

join.freq

Join class for histogram

-- K --

kendall	Correlation of Kendall
kruskal	Kruskal Wallis test and multiple comparison of treatments.
kurtosis	Finding the Kurtosis coefficient

-- L --

lastC	Setting the last character of a chain
lateblight	LATEBLIGHT - Simulator for potato late blight Version LB2004
lineXtester	Line x Tester Analysis
LSD.test	Multiple comparisons, "Least significant difference" and Adjust P-values
LxT	Data Line by tester

-- M --

markers	Data of molecular markers
Median.test	Median test. Multiple comparisons
melon	Data of yield of melon in a Latin square experiment
montecarlo	Random generation by Montecarlo

-- N --

natives	Data of native potato
nonadditivity	Nonadditivity model test
normal.freq	Normal curve on the histogram

-- O --

ogive.freq	Plotting the ogive from a histogram
order.group	Ordering the treatments according to the multiple comparison
orderPvalue	Grouping the treatments averages in a comparison with a minimum value

-- P --

pamCIP	Data Potato Wild
paracsho	Data of Paracsho biodiversity
path.analysis	Path Analysis
PBIB.test	Analysis of the Partially Balanced Incomplete Block Design
plot.AMMI	PLOT AMMI
plot.graph.freq	Histogram
plot.group	Plotting the multiple comparison of means
plots	Data for an analysis in split-plot
plrv	Data clones from the PLRV population
polygon.freq	The polygon of frequency on the histogram
potato	Data of cutting

-- R --

ralstonia	Data of assessment of the population in the soil R.solanacearum
reg.homog	Homologation of regressions
REGW.test	Ryan, Einot and Gabriel and Welsch multiple range test
resampling.cv	Resampling to find the optimal number of markers
resampling.model	Resampling for linear models
rice	Data of Grain yield of rice variety IR8
RioChillon	Data and analysis Mother and baby trials

-- S --

scheffe.test	Multiple comparisons, scheffe
similarity	Matrix of similarity in binary data
simulation.model	Simulation of the linear model under normality
sinRepAmmi	Data for AMMI without repetition
skewness	Finding the skewness coefficient
SNK.test	Student-Newman-Keuls (SNK)
soil	Data of soil analysis for 13 localities
sp.plot	Splip-Plot analysis
ssp.plot	Split-split-Plot analysis
stability.nonpar	Nonparametric stability analysis
stability.par	Stability analysis. SHUKLA'S STABILITY VARIANCE AND KANG'S
stat.freq	Descriptive measures of grouped data
strip.plot	Strip-Plot analysis
sturges.freq	Class intervals for a histogram, the rule of Sturges
summary.graph.freq	frequency Table of a Histogram
sweetpotato	Data of sweetpotato yield

-- T --

table.freq	frequency Table of a Histogram
tapply.stat	Statistics of data grouped by factors

-- V --

vark	Variance K, ties, Kendall

-- W --

waerden.test	Multiple comparisons. The van der Waerden (Normal Scores)
waller	Computations of Bayesian t-values for multiple comparisons
waller.test	Multiple comparisons, Waller-Duncan
weatherSeverity	Weather and Severity
wilt	Data of Bacterial Wilt (AUDPC) and soil

-- Y --

yacon

Data Yacon

-- Z --

zigzag

order plot in serpentine