Multi-Layer Group-Lasso

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Documentation for package ‘MLGL’ version 1.0.0

• DESCRIPTION file.
• Package NEWS.

Help Pages

MLGL-package	MLGL
bootstrapHclust	Hierarchical Clustering with distance matrix computed using bootstrap replicates
coef.cv.MLGL	Get coefficients from a 'cv.MLGL' object
coef.MLGL	Get coefficients from a 'MLGL' object
computeGroupSizeWeight	Compute the group size weight vector with an authorized maximal size
cv.MLGL	Multi-Layer Group-Lasso with cross V-fold validation
Ftest	F-test
fullProcess	Full process of MLGL
fullProcess.default	Full process of MLGL
fullProcess.formula	Full process of MLGL
hierarchicalFDR	Hierarchical testing with FDR control
hierarchicalFWER	Hierarchical testing with FWER control
HMT	Hierarchical Multiple Testing procedure
listToMatrix	Obtain a sparse matrix of the coefficients of the path
MLGL	Multi-Layer Group-Lasso
MLGL.default	Multi-Layer Group-Lasso
MLGL.formula	Multi-Layer Group-Lasso
overlapgglasso	Group-lasso with overlapping groups
partialFtest	Partial F-test
plot.cv.MLGL	Plot the cross-validation obtained from 'cv.MLGL' function
plot.fullProcess	Plot the path obtained from 'fullProcess' function
plot.HMT	Plot the path obtained from 'HMT' function
plot.MLGL	Plot the path obtained from 'MLGL' function
plot.stability.MLGL	Plot the stability path obtained from 'stability.MLGL' function
predict.cv.MLGL	Predict fitted values from a 'cv.MLGL' object
predict.MLGL	Predict fitted values from a 'MLGL' object
print.fullProcess	Print Values
print.HMT	Print Values
print.MLGL	Print Values
selFDR	Selection from hierarchical testing with FDR control
selFWER	Selection from hierarchical testing with FWER control
simuBlockGaussian	Simulate multivariate Gaussian samples with block diagonal variance matrix
stability.MLGL	Stability Selection for Multi-Layer Group-lasso
summary.fullProcess	Object Summaries
summary.HMT	Object Summaries
summary.MLGL	Object Summaries
uniqueGroupHclust	Find all unique groups in 'hclust' results