Personalised Synthetic Controls

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Documentation for package ‘psc’ version 1.3.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

acc	acc
bin.mod	Example model for a survival outcome
cfmDataSumm	Summarising data within a CFM
cfmDataVis	Visualising data within a CFM
coef.psc	Returns the coefficeint estimate of a psc object.
cont.mod	Example model for a survival outcome
count.mod	Example model for a survival outcome
data	Example Dataset of patients with aHCC receiving Lenvetanib
dataComb	A generic function for cleaning data ready for analysis
dataComb.flexsurvreg	Function for cleaning the data of a model with class 'flexsurvreg'
dataComb.glm	Function for cleaning the data of a model with class 'flexsurvreg'
dataComb.pscCFM	Function for cleaning the data of a model with class
dataSumm	A function which provides basic summary information of a matrix x
data_match	A function to ensure that data from the cfm and data cohort are compatible
e4_data	Example Dataset of patients treated with GemCap in the ESPAC-4 trial
facVis	Visualising Categorical Data
facVisComp	Visualising Categorical Data
gemCFM	Model for a survival outcome based on Gemcitbine patietns from ESPAC-3
initParm	Fucntion for estimating initial parameter values 'flexsurvreg'
initParm.flexsurvreg	Fucntion for estimating initial parameter values 'flexsurvreg'
initParm.glm	Fucntion for estimating initial parameter values
initParm.pscCFM	Fucntion for estimating initial parameter values
lik.flexsurvreg	Likelihood function for a psc model of class 'flexsurvreg'
lik.flexsurvreg.mtc	Likelihood function for a psc model of class 'flexsurv' with multiple treatment comparisons
lik.glm	Likelihood function for a psc model of class 'glm'
lik.glm.mtc	Likelihood function for a psc model of class 'glm' with multiple treatment comparisons
linPred	Estimates the linear predictor of a psc object
modelExtract	A generic function for extracting model information
modelExtract.flexsurvreg	A generic function for extracting model information
modelExtract.glm	A generic function for extracting model information
modp	modp
numVis	Visualising Categorical Data
numVisComp	Visualising Categorical Data
plot.psc	Function for Plotting PSC objects
plot.psc.binary	Function for Plotting PSC objects
plot.psc.cont	Function for Plotting PSC objects
plot.psc.count	Function for Plotting PSC objects #' A function which illsutrates the predicted response under the counter factual model and the observed response under the experimental treatment(s).
plot.psc.flexsurvreg	Function for Plotting PSC objects
print.psc	Personalised Synthetic Controls - print
print.quiet_gglist	quiet_gglist
print.quiet_gtsumm	quiet_gtsumm
print.quiet_list	quiet_gtsumm
psc.object	Fitted 'psc' object
pscCFM	Creating a CFM model which can be shared
pscEst	Function for performing estimation procedures in 'pscfit'
pscEst.flexsurvreg	Function for estimating initial parameter values 'flexsurvreg'
pscEst.glm	Function for estimating initial parameter values 'flexsurvreg'
pscEst.pscCFM	Function for estimating initial parameter values 'flexsurvreg'
pscfit	Personalised Synthetic Controls model fit
pscSumm	Personalised Synthetic Controls - summary
summary.psc	Personalised Synthetic Controls - summary
surv.mod	Example model for a survival outcome
surv_fpm	A function to obtain survival estimates from a flexible parametric model
visComp	Visualising Comparisons between a CFM and a DC